Forget, A.L.,
Dombrowski, C.C.,
Amitani, I.,
and Kowalczykowski, S.C.
(2013)
Exploring protein-DNA interactions in 3D using in situ construction,
manipulation, and visualization of individual DNA dumbbells with optical traps, microfluidics, and fluorescence microscopy.
Nature Protocols, 8, 525-538. PMID:
23411634 [Abstract]
[Full Text]
[PDF]
Amitani,
I., Liu, B.,
Dombrowski, C.C., Baskin, R.J., and
Kowalczykowski, S.C.
(2010)
Watching individual proteins acting on single molecules of DNA.
In: Single Molecule Tools: Fluorescence Based Approaches, Part A,
Methods Enzymol., 472, Nils G. Walters, editor, Burlington: Academic
Press, 261-291
ISBN:
978-0-12-374954-3; doi: 10.1016/S0076-6879(10)72007-3. PMID:
20580968; PMCID: PMC3119597
[Abstract] [Full Text] [PDF]
Hilario,
J. and Kowalczykowski, S.C.
(2010)
Visualizing protein-DNA interactions at the single-molecule level.
Curr. Opin. Chem. Biol.,
14,
15-22. PMID: 19945909;
PMCID: PMC2819561
[Abstract]
[Full Text]
[PDF]
Forget.
A.L. and Kowalczykowski, S.C.
(2010)
Single-molecule imaging brings Rad51 nucleoprotein filaments into focus.
Trends in Cell Biology, 20, 269-276 (published online
March 17, 2010, as doi:10.1016/j.tcb.2010.02.004).
PMID: 20299221;
PMCID: PMC2862779
[Abstract] [Full Text] [PDF]
Nimonkar, A.V. and
Kowalczykowski,
S.C.
(2009)
Second-end DNA capture in double-strand break repair: How to catch a DNA by
its tail.
Cell Cycle, 8,
1816-1817. PMID:
19471119; PMCID: PMC3051008.
[Full Text] [PDF]
Carreira, A.
and
Kowalczykowski,
S.C.
(2009)
BRCA2: Shining light on the regulation of DNA-binding selectivity by RAD51.
Cell Cycle,
21,
11-13. PMID: 19838057; PMCID: PMC3050000. [Full Text] [PDF]
Kowalczykowski,
S.C.
(2008)
Structural biology: Snapshots of DNA repair.
Nature,
453,
463-466 (published online May 21, 2008 as doi:10.1038/453463a). PMID:
18497811. [Full Text] [PDF]
Dillingham, M.S. and
Kowalczykowski,
S.C.
(2008)
RecBCD enzyme and the repair of double-stranded DNA breaks.
Microbiol. Mol. Biol. Rev., 72,
642–671
(published online as doi:10.1128/MMBR.00020-08). PMID:
19052323; PMCID: PMC2593567
[Abstract] [Full Text]
[PDF]
Galletto, R.
and
Kowalczykowski,
S.C.
(2007)
RecA.
Curr. Biol, 17, R395-R397. PMID: 17550759.
[Full
Text] [PDF]
Linder, P. and
Kowalczykowski,
S.C.
(2006)
Helicases and NTP-driven nucleic acid machines: Structure, function
and roles in human disease.
Nucl. Acids Res., 34,
4081.
PMCID:
PMC3303210.
[Full
Text] [PDF]
Bianco, P.R. and
Kowalczykowski, S.C.
(2005)
RecA protein.
In: “Encyclopedia of Life Sciences”, John
Wiley & Sons, Ltd: Chichester,
http://www.els.net/ [doi:10.1038/npg.els.0003925]
[PDF]
[HTML]
Kowalczykowski, S.C.
(2005)
Catalyst of a catalyst.
Nature, 433, 591-592. PMID: 15703734
[Full
Text] [PDF]
Spies, M.,
Dillingham, M.S.,
and
Kowalczykowski, S.C.
(2005)
DNA helicases.
In “McGraw-Hill Encyclopedia of Science & Technology”, New York,
N. Y. [Preprint]
Spies, M. and
Kowalczykowski, S.C.
(2005)
Homologous recombination by the RecBCD and RecF pathways.
In “The Bacterial Chromosome”, N.P. Higgins, ed., (ASM Press,
Washington, D.C.), 389-403.
[PDF]
[Preprint]
Spies, M.,
Dillingham, M.S.,
and
Kowalczykowski, S.C.
(2003)
DNA helicases.
In “McGraw-Hill Yearbook of Science & Technology”, New York, N. Y.,
95-98 [PDF]
[scanned-PDF] [Page proof]
Chédin, F. and
Kowalczykowski, S.C.
(2002)
A novel family of regulated helicases/nucleases from Gram-positive bacteria:
insights into the initiation of DNA recombination.
Mol. Microbiol. 43, 823-834. PMID:
11929535.
[Full
Text] [PDF]
Kowalczykowski, S.C.
(2002)
Molecular mimicry connects BRCA2 to Rad51 and recombinational DNA repair.
Nature Struct. Biol., 9, 897-899. PMID:
12447354.
[Full
Text] [PDF]
Seitz, E.M., Haseltine, C. A., and
Kowalczykowski, S.C.
(2001)
DNA Recombination and repair in the Archaea.
In ”Archaea: Ancient Microbes, Extreme Environments, and the Origin of
Life”, P. Blum, ed.,
Advances in Applied Microbiology, 50,101-169.
[PDF] [Preprint]
Dillingham, M. S. and
Kowalczykowski, S.C.
(2001)
A Step Backward in Advancing DNA Replication: Rescue of Stalled Replication
Forks by RecG.
Mol. Cell, 8, 734-736. PMID: 11684009.
[Abstract] [Full
Text] [PDF]
Kowalczykowski, S.C.
(2000)
Some assembly required.
Nature Structural Biology, 7, 1087-1089.
PMID: 11101884.
[Full
Text] [PDF]
[Extra Figure]
Kowalczykowski, S.C.
(2000)
Initiation of genetic recombination and recombination-dependent replication.
Trends
Biochem. Sci., 25, 156-165. PMID:
10754547. [Abstract]
[Full
Text] [PDF]
Kowalczykowski, S.C.
and von Hippel, P.H. (eds.) (2000)
The recombination–replication interface
Trends Biochem. Sci., 25.
[Full Text]
[Contents]
[Summary and Table of Proteins]
Harmon, F.G. and Kowalczykowski,
S.C. (2000)
Coupling of DNA helicase function to DNA strand exchange.
Methods
Mol. Biol., 152, 75-89.
[Abstract] [Full Text] [PDF]
Bianco, P.R. and
Kowalczykowski, S.C. (1999)
RecA protein.
In: Encyclopedia of Life Sciences, Nature
Publishing Group, London, http://www.els.net
[Abstract] [Full
Text]
[PDF]
[Preprint.PDF]
Arnold, D.A. and Kowalczykowski, S.C.
(1999)
RecBCD helicase/nuclease.
In: Encyclopedia of Life Sciences, Nature
Publishing Group, London, http://www.els.net
[Abstract]
[Full
text]
[PDF] [Preprint.PDF]
Bianco, P.R., Tracy, R.B., and
Kowalczykowski, S.C. (1998)
DNA strand exchange proteins: A biochemical and physical comparison.
Front. Biosci., 3, D570-D603.
PMID: 9632377.
[Abstract] [Full Text] [PDF]
Mazin, A.V. and
Kowalczykowski, S.C. (1998)
The synergistic interaction between RecA protein and SSB protein during DNA strand
exchange.
In: "Modern Concepts in Evolutionary Genetics", (V.K. Shumny and A.L.
Markel, eds.), Nauka, Novosibirsk, Russia, Proceedings of the Conference. [Preprint.PDF]
Kowalczykowski, S.C. and Zarling,
D. (1995)
Homologous recombination proteins and their potential applications in gene
targeting technology.
In: "Gene Targeting", (M.A. Vega, ed.) CRC Press, Inc., Chapter 7,
167-210. [PDF]
Kowalczykowski, S.C., Dixon, D.A., Eggleston,
A.K., Lauder, S.D., and Rehrauer,
W.M. (1994)
Biochemistry of homologous recombination in Escherichia coli.
Microbiol. Rev., 58, 401-465. PMID:
7968921; PMCID: PMC372975.
[Abstract] [Full
Text]
[PDF]
(Highly
cited paper
selected by
ISI Essential Science Indicators. This paper ranks among the top 15 highly cited papers in the field of
Microbiology, with a total of 511 citations to date.)
(in-cites,
April 2002 - Citing URL:
http://www.in-cites.com/BI-april2002.html)
Read interview with SK
Kowalczykowski, S.C. and Eggleston, A.K.
(1994)
Homologous pairing and DNA strand exchange proteins.
Annu. Rev. Biochem., 63, 991-1043.
PMID: 7979259. [Full
Text]
[PDF]
Kowalczykowski, S.C. (1994)
In vitro reconstitution of homologous recombination reactions.
Experientia, 50, 204-215.
PMID: 8143794.
[Abstract] [Full
Text]
[PDF]
Kowalczykowski, S.C. (1991)
Biochemistry of genetic recombination: Energetics and mechanism of DNA strand
exchange.
Annu. Rev. Biophys. Biophys. Chem. 20, 539-575.
PMID: 1831022.
[PDF]
Eggleston, A.K. and
Kowalczykowski, S.C.
(1991)
An overview of homologous pairing and DNA strand exchange proteins.
Biochimie 73, 163-176.
PMID: 1653031.
[Abstract] [Full
Text]
[PDF]
Kowalczykowski, S.C. (1991)
Biochemical and biological function of Escherichia coli RecA protein:
behavior of mutant RecA proteins.
Biochimie 73, 289-304. PMID:
1883888. [Abstract] [Full
Text]
[PDF]
Kowalczykowski, S.C. and Roman, L.J.
(1990)
Reconstitution of homologous pairing activity in vitro dependent upon the
combined activities of purified E. coli RecA, RecBCD, and SSB proteins.
In: Molecular Mechanisms in DNA Replication and Recombination, C. Richardson and R.
Lehman, eds. (Alan R. Liss, Inc. New York), (New Series) 127, 357-373. [PDF]
Kowalczykowski, S.C. (1990)
Thermodynamic data for protein-nucleic acid interactions.
In: Landolt-Bornstein: Numerical Data and Functional Relationships in
Science and Technology (New Series) Group VII: Biophysics, Nucleic Acids 1d,
W. Saenger, ed. (Berlin: Springer-Verlag), 244-263. [PDF]
Kowalczykowski, S.C. (1987)
Mechanistic aspects of the DNA strand exchange activity of Escherichia coli
recA protein.
Trends Biochem. Sci. 12, 141-145.
[Abstract] [PDF]
von Hippel, P.H.,
Kowalczykowski, S.C., Lonberg, N., Newport, J.W., Paul, L.S., Stormo,
G.D., and Gold, L. (1983)
Autoregulation of expression of gene 32 protein of bacteriophage T4: A
quantitative analysis.
In: The Bacteriophage T4, C.K. Matthews, E.M. Kutter, G. Mosig and P.B.
Berget, eds. (Washington, D.C.: American Society for Microbiology), pp. 202-207.
[PDF]
Kowalczykowski, S.C., Bear, D.G., and von Hippel, P.H. (1981).
Single-stranded DNA binding proteins.
In: The Enzymes, P.D. Boyer, eds. (New York: Academic Press), pp. 373-442. [PDF]